PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009628595.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 176aa    MW: 20148.6 Da    PI: 8.927
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009628595.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY51.71.7e-16135176240
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkver 40 
                     dDgy+WrKYGqK+  g+++prsYY+C+++   +C+++k ++r
  XP_009628595.1 135 DDGYSWRKYGQKDTFGAKYPRSYYQCAHRykqNCEATKYIQR 176
                     8***************************9999*******997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.6E-17126176IPR003657WRKY domain
PROSITE profilePS5081117.35129176IPR003657WRKY domain
SuperFamilySSF1182902.75E-15132176IPR003657WRKY domain
SMARTSM007744.5E-11134176IPR003657WRKY domain
PfamPF031063.1E-14135176IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
MDFSINPEYN SLINELTQGM EHTKQLRAYL RTVPSTSETT QEVLLQKIIY SYEQSLLILK  60
WSGSTPKSSL PLPPTIGAIE SPSFANGSPK SDDMKRSFIH HPELIDNSKR SKKSQPIWSE  120
EVRVSAESGS EGPIDDGYSW RKYGQKDTFG AKYPRSYYQC AHRYKQNCEA TKYIQR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009628595.11e-129PREDICTED: probable WRKY transcription factor 53 isoform X2
RefseqXP_009628594.11e-129PREDICTED: probable WRKY transcription factor 53 isoform X1
SwissprotQ9SUP64e-37WRK53_ARATH; Probable WRKY transcription factor 53
TrEMBLM1A5583e-72M1A558_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000149497e-72(Solanum tuberosum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.13e-35WRKY family protein